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| Unified Medical Language System | |
2008AB Gene Ontology Source Information
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Counts
| Term Type | Description | Count (MRCONSO.RRF) |
|---|---|---|
| SY | Designated synonym | 44324 |
| PT | Designated preferred name | 24983 |
| ET | Entry "term" | 12030 |
| OP | Obsolete preferred term | 1154 |
| MTH_PT | Metathesaurus preferred term | 866 |
| IS | Obsolete Synonym | 520 |
| MTH_SY | MTH Designated synonym | 506 |
| MTH_ET | Metathesaurus entry term | 126 |
| OET | Obsolete entry term | 123 |
| MTH_OP | Metathesaurus obsolete preferred term | 25 |
| MTH_IS | Metathesaurus-supplied form of obsolete synonym | 3 |
Background
- Every atom has a separate row in MRCONSO.RRF.
- Sample data below are examples of strings (atoms) associated with each source Term Type.
- Samples below are taken from MRCONSO.RRF, although not every field is shown.
- Every atom is assigned a Metathesaurus Term Type based on source documentation or analysis.
- Term Type abbreviations and full names are listed under 'TTY' in Appendix B3.
- Term Types also appear in MRRANK.RRF.
- See Section 2.7.1.3.4 in UMLS Documentation, Section 2, Metathesaurus for more information on MRCONSO.RRF, including examples of full rows displaying all data columns.
Sample Data
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1327491 | A11612920 | L3500018 | S4024958 | GO:0001583 | GO:0001583 | sensory transduction of salty taste |
| C1817459 | A11581914 | L6350148 | S7279788 | GO:0002291 | GO:0002291 | T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell |
| C1152832 | A11607258 | L2427831 | S6664709 | GO:0004926 | GO:0004926 | non-G-protein-coupled 7TM receptor activity |
| C1153021 | A11582411 | L2428152 | S2867340 | GO:0005284 | GO:0005284 | insulin-activated sodium/amino acid transporter activity |
| C1749493 | A11613662 | L6349824 | S7276943 | GO:0005955 | GO:0005955 | protein phosphatase type 2B complex |
| C1156814 | A11595243 | L2325081 | S2746357 | GO:0006541 | GO:0006541 | glutamine metabolism |
| C1158205 | A11626256 | L6346085 | S7277275 | GO:0006739 | GO:0006739 | reduced NADP metabolic process |
| C1158205 | A11606541 | L5821232 | S6667395 | GO:0006739 | GO:0006739 | reduced nicotinamide adenine dinucleotide phosphate metabolism |
| C1156231 | A11601666 | L2320637 | S6664817 | GO:0006999 | GO:0006999 | nuclear pore organisation and biogenesis |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1150380 | A11587888 | L2431544 | S2867529 | GO:0000250 | GO:0000250 | lanosterol synthase activity |
| C1327249 | A11581680 | L3494352 | S4025820 | GO:0000382 | GO:0000382 | U12-type nuclear mRNA 3'-splice site recognition |
| C1820132 | A11618908 | L6346010 | S7276737 | GO:0000435 | GO:0000435 | positive regulation of transcription from RNA polymerase II promoter by galactose |
| C1818797 | A11606992 | L6349556 | S7274763 | GO:0002683 | GO:0002683 | negative regulation of immune system process |
| C1819721 | A11613161 | L6346153 | S7277898 | GO:0002715 | GO:0002715 | regulation of natural killer cell mediated immunity |
| C1152257 | A11619342 | L2428855 | S2865544 | GO:0004047 | GO:0004047 | aminomethyltransferase activity |
| C1151231 | A11582210 | L2430292 | S2867181 | GO:0004399 | GO:0004399 | histidinol dehydrogenase activity |
| C1151931 | A11588447 | L3494851 | S4021755 | GO:0004468 | GO:0004468 | lysine N-acetyltransferase activity |
| C1744640 | A11601123 | L3493789 | S4028917 | GO:0005142 | GO:0005142 | interleukin-11 receptor binding |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1751191 | A14255541 | L5828802 | S6663211 | GO:0000025 | GO:0000025 | maltose hydrolysis |
| C1622355 | A14266098 | L0316640 | S0394419 | GO:0000268 | GO:0000268 | PTS receptor |
| C2263014 | A14260911 | L7610620 | S8821627 | GO:0000336 | GO:0000336 | stimulation of DNA transposition |
| C2265247 | A14245068 | L7607134 | S8823962 | GO:0000824 | GO:0000824 | EC:2.7.1.151 |
| C1325152 | A14234694 | L3496447 | S6662401 | GO:0000824 | GO:0000824 | inositol polyphosphate multikinase activity |
| C1325420 | A14260977 | L5821159 | S6670501 | GO:0001785 | GO:0001785 | PGJ receptor activity |
| C2245998 | A14250393 | L7621026 | S8811854 | GO:0001929 | GO:0001929 | inhibition of exocyst assembly |
| C2248004 | A14239928 | L7624804 | S8811513 | GO:0002037 | GO:0002037 | inhibition of L-glutamate transport |
| C2256353 | A14234894 | L7617264 | S8811960 | GO:0002921 | GO:0002921 | inhibition of humoral immune response |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1155629 | A11606602 | L2322748 | S2741978 | GO:0000067 | GO:0000067 | DNA replication and chromosome cycle |
| C1325832 | A11606633 | L3497216 | S4025923 | GO:0000219 | GO:0000219 | vacuolar hydrogen-transporting ATPase |
| C1149552 | A11582071 | L2429777 | S2866048 | GO:0003754 | GO:0003754 | chaperone activity |
| C1523041 | A11607058 | L2428311 | S2864661 | GO:0003782 | GO:0003782 | F-actin capping activity |
| C1149257 | A11625537 | L2428309 | S2865717 | GO:0003784 | GO:0003784 | barbed-end actin capping/severing activity |
| C1523039 | A11588317 | L2428315 | S2865318 | GO:0003789 | GO:0003789 | actin filament severing activity |
| C1149595 | A11582083 | L2429952 | S2866174 | GO:0003811 | GO:0003811 | complement activity |
| C1149040 | A11582109 | L2431094 | S2869077 | GO:0003925 | GO:0003925 | small monomeric GTPase activity |
| C1149042 | A11625560 | L2431089 | S2865073 | GO:0003928 | GO:0003928 | RAB small monomeric GTPase activity |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1166826 | A11606591 | L2486643 | S2937295 | GO:0000015 | GO:0000015 | phosphopyruvate hydratase complex location |
| C1167141 | A11612752 | L2486597 | S2937427 | GO:0000127 | GO:0000127 | transcription factor TFIIIC complex location |
| C1167313 | A11606619 | L2486679 | S2937445 | GO:0000151 | GO:0000151 | ubiquitin ligase complex location |
| C1167076 | A11594158 | L2486676 | S2937270 | GO:0000152 | GO:0000152 | nuclear ubiquitin ligase complex location |
| C1325673 | A11612818 | L3497272 | S4023534 | GO:0000344 | GO:0000344 | plastid-encoded plastid RNA polymerase complex B location |
| C1325582 | A11612863 | L3498492 | S4022767 | GO:0000799 | GO:0000799 | nuclear condensin complex location |
| C1522735 | A11618944 | L5383522 | S6158508 | GO:0000812 | GO:0000812 | SWR1 complex location |
| C1522737 | A11618777 | L5383424 | S6157207 | GO:0000814 | GO:0000814 | ESCRT II complex location |
| C1167247 | A11581761 | L2486450 | S2937462 | GO:0001518 | GO:0001518 | voltage-gated sodium channel complex location |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1325386 | A11618823 | L0073366 | S4024786 | GO:0000047 | GO:0000047 | Rieske iron-sulphur protein |
| C1325832 | A11606634 | L0517156 | S0753605 | GO:0000219 | GO:0000219 | V-ATPase |
| C1149572 | A11582080 | L2430237 | S6159097 | GO:0003793 | GO:0003793 | defence/immunity protein activity |
| C1325356 | A11619291 | L3499745 | S4022034 | GO:0003819 | GO:0003819 | MHC protein |
| C1325379 | A11613234 | L0144270 | S0190700 | GO:0003892 | GO:0003892 | PCNA |
| C1149550 | A11607141 | L2326029 | S2742478 | GO:0004384 | GO:0004384 | MAGUK |
| C1325291 | A11582391 | L0008464 | S4026653 | GO:0005204 | GO:0005204 | chondroitin sulphate proteoglycan |
| C1325292 | A11594893 | L3498334 | S4026648 | GO:0005205 | GO:0005205 | chondroitin sulphate/dermatan sulphate proteoglycan |
| C1325333 | A11625838 | L0128718 | S4028545 | GO:0005206 | GO:0005206 | heparin sulphate proteoglycan |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1166826 | A11612721 | L2486573 | S2937089 | GO:0000015 | GO:0000015 | enolase complex location |
| C1167154 | A11612746 | L5825939 | S6670383 | GO:0000111 | GO:0000111 | NEF2 complex location |
| C1167142 | A11594147 | L5825889 | S6669039 | GO:0000118 | GO:0000118 | HDAC complex location |
| C1167136 | A11600385 | L5381708 | S6155981 | GO:0000123 | GO:0000123 | histone acetylase complex location |
| C1167082 | A11600394 | L2486694 | S2937355 | GO:0000172 | GO:0000172 | ribonuclease mitochondrial RNA processing complex location |
| C1325658 | A11612798 | L5382446 | S6156006 | GO:0000274 | GO:0000274 | hydrogen-transporting ATP synthase location, stator stalk (sensu Eukaryota) |
| C1523292 | A11587934 | L5383462 | S6157711 | GO:0000506 | GO:0000506 | GPI-GlcNAc transferase complex location |
| C1523292 | A11587936 | L5383469 | S6157714 | GO:0000506 | GO:0000506 | GPI-GnT complex location |
| C1325602 | A11587978 | L3498644 | S4025973 | GO:0000938 | GO:0000938 | VFT tethering complex location |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1753322 | A14234633 | L2486746 | S2936978 | GO:0000119 | GO:0000119 | TRAP complex location |
| C1748471 | A14234688 | L5825967 | S6670707 | GO:0000797 | GO:0000797 | Smc2-Smc4 complex location |
| C1325614 | A14260953 | L3498555 | S4028096 | GO:0000928 | GO:0000928 | gamma-tubulin complex location (sensu Saccharomyces) |
| C1760034 | A14271475 | L5383242 | S6156040 | GO:0000939 | GO:0000939 | inner centromere core complex location |
| C1817207 | A14271523 | L5825841 | S6660743 | GO:0001931 | GO:0001931 | distal pole complex location |
| C1325807 | A14267300 | L3496960 | S4021947 | GO:0005579 | GO:0005579 | membrane attack complex location protein alphaM chain |
| C1325808 | A14256835 | L3497224 | S4021948 | GO:0005579 | GO:0005579 | membrane attack complex location protein beta2 chain |
| C1167386 | A14267301 | L2486408 | S2937041 | GO:0005602 | GO:0005602 | complement component C1q complex location |
| C1621865 | A14262064 | L5823328 | S6668851 | GO:0005662 | GO:0005662 | single-stranded DNA-binding protein complex location |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1166804 | A14234686 | L0360959 | S0464738 | GO:0000504 | GO:0000504 | 26S proteasome |
| C1148750 | A14245319 | L2319756 | S2750066 | GO:0003694 | GO:0003694 | plasmid-associated protein |
| C1749311 | A14250890 | L2317400 | S2743154 | GO:0004171 | GO:0004171 | [eIF-5A]-deoxyhypusine synthase |
| C1655269 | A14245709 | L2324409 | S2748321 | GO:0004299 | GO:0004299 | multicatalytic endopeptidase |
| C1622946 | A14272109 | L0147887 | S0196878 | GO:0004299 | GO:0004299 | proteasome |
| C1621292 | A14245710 | L2323043 | S2750690 | GO:0004299 | GO:0004299 | proteasome endopeptidase complex |
| C1325639 | A14261642 | L0061608 | S0162114 | GO:0004374 | GO:0004374 | glycine synthase |
| C1152834 | A14251405 | L3496749 | S4026040 | GO:0004928 | GO:0004928 | Wnt receptor activity |
| C1152834 | A14262017 | L3496749 | S4026040 | GO:0004929 | GO:0004929 | Wnt receptor activity |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1325819 | A11619626 | L3499649 | S4024800 | GO:0005562 | GO:0005562 | RNA location |
| C1325781 | A11619628 | L3498822 | S4027037 | GO:0005567 | GO:0005567 | cytosolic ribosomal RNA location |
| C1325831 | A11607393 | L3499651 | S4025899 | GO:0005571 | GO:0005571 | untranslated RNA location |
| C1325820 | A11613570 | L3499526 | S4024805 | GO:0005572 | GO:0005572 | RNA polymerase II transcribed untranslated RNA location |
| C1325824 | A11619630 | L3499650 | S4025398 | GO:0005573 | GO:0005573 | telomerase RNA location |
| C1325786 | A11607396 | L3499053 | S4027440 | GO:0005574 | GO:0005574 | DNA location |
| C1325807 | A11607399 | L3496960 | S4021947 | GO:0005580 | GO:0005580 | membrane attack complex location protein alphaM chain |
| C1167120 | A11607414 | L2486484 | S2937066 | GO:0005660 | GO:0005660 | delta-DNA polymerase cofactor complex location |
| C1325823 | A11619671 | L3499648 | S4025041 | GO:0005733 | GO:0005733 | small nucleolar RNA location |
| cui | aui | lui | sui | sdui | code | str |
|---|---|---|---|---|---|---|
| C1167120 | A11613588 | L2486484 | S6660488 | GO:0005660 | GO:0005660 | delta DNA polymerase cofactor complex location |
| C1167464 | A11626835 | L3494994 | S4028623 | GO:0009335 | GO:0009335 | holo-ACP synthase complex location |
| C1167436 | A11583394 | L2486520 | S2937070 | GO:0009352 | GO:0009352 | dihydrolipoamide dehydrogenase complex location |
Last reviewed: 02 February 2009
Last updated: 02 February 2009
First published: 02 February 2009
Metadata| Permanence level: Permanence Not Guaranteed