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Unified Medical Language System® (UMLS®)

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2012AB Gene Ontology Source Information

Counts

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Term Type Description Count (MRCONSO.RRF)
SY Designated synonym 54107
PT Designated preferred name 34713
ET Entry term 17970
OP Obsolete preferred name 1630
MTH_PT Metathesaurus preferred term 1417
IS Obsolete Synonym 1188
OET Obsolete entry term 820
MTH_SY MTH Designated synonym 789
MTH_ET Metathesaurus entry term 491
MTH_OP Metathesaurus obsolete preferred term 31
MTH_IS Metathesaurus-supplied form of obsolete synonym 7

Notes

  • A term type indicates the role an atom plays in its source
  • An atom is the smallest unit of naming in a source; that is, a specific string with specific code values and identifiers from a specific source.
  • Every atom has a separate row in MRCONSO.RRF. Every atom is assigned a term type.
  • Term types are assigned based on source documentation or NLM understanding of the source.
  • Sample data are provided for every term type in the source (see below).
  • See Metathesaurus Documentation for a list of all term type abbreviations and their full names.
  • See Metathesaurus Documentation for a list of sources and their associated term types, listed in default order of precedence.
  • See Section 2.3 of the UMLS Reference Manual for more information on terms and term types in the UMLS Metathesaurus.

Sample Data

SY

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CUI AUI LUI SUI SDUI CODE STR
C1155556 A11606628 L2318465 S2743289 GO:0000186 GO:0000186 activation of MAP/ERK kinase kinase
C1154579 A11581768 L5383144 S6157512 GO:0001560 GO:0001560 regulation of cell growth by sensing of exogenous stimulus
C1523365 A11594374 L5383043 S6157559 GO:0001910 GO:0001910 regulation of immune cell mediated cytotoxicity
C1819880 A11625503 L6345733 S7274386 GO:0002868 GO:0002868 negative regulation of B-lymphocyte deletion
C2266786 A11600856 L5382143 S6158107 GO:0003825 GO:0003825 trehalose-phosphate synthetase activity
C1158191 A11601603 L2326208 S2749028 GO:0006753 GO:0006753 nucleoside phosphate metabolism
C1155501 A11620167 L3499688 S6664685 GO:0007263 GO:0007263 nitric oxide-mediated signal transduction
C1158349 A11595518 L2325380 S2751539 GO:0007556 GO:0007556 regulation of juvenile hormone metabolism
C1154326 A11626482 L5823197 S6671846 GO:0007635 GO:0007635 behavioral response to chemical stimulus

PT

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CUI AUI LUI SUI SDUI CODE STR
C1155925 A11594303 L5383297 S6158907 GO:0001539 GO:0001539 ciliary or flagellar motility
C1621278 A11588101 L5821269 S6666072 GO:0001954 GO:0001954 positive regulation of cell-matrix adhesion
C1621276 A11594394 L5823387 S6661331 GO:0001968 GO:0001968 fibronectin binding
C1818773 A11613140 L6348281 S7274943 GO:0002659 GO:0002659 negative regulation of peripheral tolerance induction
C1149864 A11607107 L2427210 S4024291 GO:0004113 GO:0004113 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
C1150087 A11613383 L2432108 S2868571 GO:0004650 GO:0004650 polygalacturonase activity
C0035553 A11595014 L0035553 S0425218 GO:0005840 GO:0005840 ribosome
C1167232 A11601303 L2316882 S2747169 GO:0005893 GO:0005893 interleukin-2 receptor complex
C1325743 A11607486 L3496856 S4026825 GO:0005926 GO:0005926 connecting hemi-adherens junction

ET

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CUI AUI LUI SUI SDUI CODE STR
C1166681 A14245020 L2322760 S2748964 GO:0000228 GO:0000228 nuclear interphase chromosome
C1158733 A14266122 L2317170 S2741469 GO:0000386 GO:0000386 3'-splice site cleavage, exon ligation
C2250746 A14250439 L7610723 S8822389 GO:0002550 GO:0002550 stimulation of plasma kallikrein-kinin cascade
C2256724 A14240135 L7615315 S8794516 GO:0003847 GO:0003847 LDL-PLA(2) activity
C2256726 A14245362 L7611553 S8795976 GO:0003847 GO:0003847 PAF 2-acylhydrolase activity
C1150462 A14261439 L1488363 S1775907 GO:0004111 GO:0004111 CK-MM
C1148711 A14251128 L2430635 S2866554 GO:0004520 GO:0004520 endonuclease G activity
C2260790 A14245866 L1121236 S1346233 GO:0004522 GO:0004522 endoribonuclease I
C2260827 A14240669 L7622407 S8823568 GO:0004530 GO:0004530 DNase activity

OP

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CUI AUI LUI SUI SDUI CODE STR
C1155563 A11587879 L2318483 S2743311 GO:0000191 GO:0000191 activation of MAPKKK (pseudohyphal growth)
C1155558 A11600399 L2318482 S2743303 GO:0000192 GO:0000192 activation of MAPKK (pseudohyphal growth)
C1155576 A11594168 L3497954 S4021912 GO:0000202 GO:0000202 MAPKKK cascade during sporulation (sensu Saccharomyces)
C1326935 A11625196 L3499895 S4024639 GO:0001564 GO:0001564 resistance to pathogenic protozoa
C1325280 A11625212 L2319482 S2743770 GO:0001597 GO:0001597 apelin-like receptor
C1138831 A11594608 L2324975 S2742205 GO:0003673 GO:0003673 Gene_Ontology
C1325321 A11625535 L3499084 S4027552 GO:0003778 GO:0003778 dynactin motor
C1325379 A11588339 L0072108 S1343800 GO:0003892 GO:0003892 proliferating cell nuclear antigen
C1149845 A11613378 L2427905 S2865890 GO:0004628 GO:0004628 calcium-independent cytosolic phospholipase A2 activity

MTH_PT

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CUI AUI LUI SUI SDUI CODE STR
C1167153 A11612744 L2486201 S6664883 GO:0000110 GO:0000110 nucleotide-excision repair factor 1 complex location
C1166720 A11625065 L2486516 S2937062 GO:0000153 GO:0000153 cytoplasmic ubiquitin ligase complex location
C0039066 A11600478 L2486743 S2937409 GO:0000795 GO:0000795 synaptonemal complex location
C1522737 A11618777 L5383424 S6157207 GO:0000814 GO:0000814 ESCRT II complex location
C1166879 A11589337 L2486619 S2937129 GO:0008275 GO:0008275 gamma-tubulin small complex location
C1167493 A11614183 L2486721 S2937319 GO:0008287 GO:0008287 protein serine/threonine phosphatase complex location
C1167505 A11614454 L2486268 S2937358 GO:0009323 GO:0009323 ribosomal-protein-alanine N-acetyltransferase complex location
C1167461 A11602169 L2486627 S2937139 GO:0009339 GO:0009339 glycolate oxidase complex location
C1167425 A11608345 L2486390 S2937010 GO:0009341 GO:0009341 beta-galactosidase complex location

IS

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CUI AUI LUI SUI SDUI CODE STR
C1325832 A11606634 L0517156 S0753605 GO:0000219 GO:0000219 V-ATPase
C1150193 A11582171 L0375553 S0519372 GO:0004242 GO:0004242 beta-MPP
C1152873 A11588577 L2427861 S2864467 GO:0005079 GO:0005079 A-kinase anchor protein activity
C1156256 A11620080 L2323321 S2747928 GO:0006943 GO:0006943 mechanochemical coupling
C1153396 A11602437 L2321661 S4028590 GO:0015001 GO:0015001 high-potential iron-sulphur carrier
C1151323 A11596502 L2427993 S4022972 GO:0016678 GO:0016678 oxidoreductase activity, acting on haem group of donors, other acceptors
C1150589 A11600309 L0884362 S1017467 GO:0016910 GO:0016910 SAPK3
C1156625 A11603122 L5828062 S6661729 GO:0019269 GO:0019269 glutamate formation, using glutamate synthase (NADPH)
C1150854 A11584405 L5824447 S6669581 GO:0019443 GO:0019443 tryptophan breakdown, using tryptophanase

OET

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CUI AUI LUI SUI SDUI CODE STR
C1622946 A14272109 L0147887 S0196878 GO:0004299 GO:0004299 proteasome
C1325639 A14261642 L0061608 S0162114 GO:0004374 GO:0004374 glycine synthase
C1325298 A14256830 L3497887 S4026735 GO:0005489 GO:0005489 class IIb cytochrome c
C1325363 A14251464 L3497884 S4022142 GO:0005489 GO:0005489 monoheme class I cytochrome c
C1325383 A14256831 L3497285 S4024647 GO:0005489 GO:0005489 respiratory chain cytochrome b6
C1153396 A14262673 L0129150 S2742244 GO:0015001 GO:0015001 HiPIP
C0201835 A14241833 L0010125 S0521046 GO:0017043 GO:0017043 corticotropin
C2246646 A14237349 L7623773 S8801547 GO:0033237 GO:0033237 beta-hydroxysteroid dehydrogenase
C2255535 A14249744 L7622883 S8828536 GO:0050516 GO:0050516 IpK2 activity

MTH_SY

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CUI AUI LUI SUI SDUI CODE STR
C1167155 A11606613 L5825940 S6670384 GO:0000112 GO:0000112 NEF3 complex location
C1167082 A11600395 L3498616 S4024808 GO:0000172 GO:0000172 RNase MRP complex location
C1325659 A11594294 L3498640 S4024891 GO:0001401 GO:0001401 SAM complex location
C1325659 A11600512 L5825973 S6670769 GO:0001401 GO:0001401 TOB complex location
C1167383 A11613573 L3498490 S4025405 GO:0005579 GO:0005579 terminal complement complex location
C1167122 A11594975 L5825952 S6670537 GO:0005663 GO:0005663 RFC complex location
C1176286 A11582482 L2486314 S7280553 GO:0005680 GO:0005680 anaphase promoting complex location
C1166824 A11625947 L2486631 S2937143 GO:0005833 GO:0005833 haemoglobin complex location
C1167419 A11625978 L6343852 S7278993 GO:0005946 GO:0005946 trehalose-6-phosphate synthase complex location

MTH_ET

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CUI AUI LUI SUI SDUI CODE STR
C1621823 A14271464 L5825965 S6670667 GO:0000796 GO:0000796 SMC complex location
C1760034 A14271475 L5383242 S6156040 GO:0000939 GO:0000939 inner centromere core complex location
C1622966 A14256856 L5825423 S6662962 GO:0005847 GO:0005847 CFII complex location
C2263093 A14256869 L7596898 S8800833 GO:0005951 GO:0005951 arginine-specific carbamoyl phosphate synthetase complex location
C1749812 A14235961 L3498494 S4026829 GO:0008180 GO:0008180 COP9 complex location
C1167135 A14272776 L2486759 S2937339 GO:0008231 GO:0008231 repressor ecdysone receptor holocomplex location
C1167482 A14236248 L2486312 S2937290 GO:0009356 GO:0009356 p-aminobenzoate synthetase complex location
C1622121 A14242136 L2486700 S2936929 GO:0030964 GO:0030964 NADH:plastoquinone reductase complex location
C1621453 A14236951 L5825970 S6670712 GO:0031298 GO:0031298 Swi1-Swi3 complex location

MTH_OP

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CUI AUI LUI SUI SDUI CODE STR
C1325819 A11619626 L3499649 S4024800 GO:0005562 GO:0005562 RNA location
C1325781 A11619628 L3498822 S4027037 GO:0005567 GO:0005567 cytosolic ribosomal RNA location
C1325831 A11607393 L3499651 S4025899 GO:0005571 GO:0005571 untranslated RNA location
C1325820 A11613570 L3499526 S4024805 GO:0005572 GO:0005572 RNA polymerase II transcribed untranslated RNA location
C1325824 A11619630 L3499650 S4025398 GO:0005573 GO:0005573 telomerase RNA location
C1325786 A11607396 L3499053 S4027440 GO:0005574 GO:0005574 DNA location
C1325807 A11607399 L3496960 S4021947 GO:0005580 GO:0005580 membrane attack complex location protein alphaM chain
C1167120 A11607414 L2486484 S2937066 GO:0005660 GO:0005660 delta-DNA polymerase cofactor complex location
C1325823 A11619671 L3499648 S4025041 GO:0005733 GO:0005733 small nucleolar RNA location

MTH_IS

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CUI AUI LUI SUI SDUI CODE STR
C1167120 A11613588 L2486484 S6660488 GO:0005660 GO:0005660 delta DNA polymerase cofactor complex location
C1167464 A11626835 L3494994 S4028623 GO:0009335 GO:0009335 holo-ACP synthase complex location
C1167436 A11583394 L2486520 S2937070 GO:0009352 GO:0009352 dihydrolipoamide dehydrogenase complex location
C0961047 A19342594 L7622447 S8823837 GO:0031375 GO:0031375 type II FAS complex location
C1621465 A19352169 L7624032 S8803839 GO:0031376 GO:0031376 cytosolic type II FAS complex location
C1621466 A19349429 L7613639 S8814613 GO:0031377 GO:0031377 mitochondrial type II FAS complex location
C1622595 A19345377 L7617901 S8817432 GO:0031378 GO:0031378 plastid type II FAS complex location