Field Number | Field Name | Description | Representation |
1 | hgnc_id | A unique ID for every approved symbol | MRCONSO.CODE; MRCONSO.SCUI |
2 | symbol | Approved gene symbol | MRCONSO.STR; MRSAT.ATN=GENESYMBOL |
3 | name | Approved name for the gene | MRCONSO.STR |
4 | locus_group | A group name for a set of related locus types | MRSAT.ATN=LOCUS_GROUP |
5 | locus_type | Specifies type as defined by HGNC (e.g., RNA, transfer) | MRSAT.ATN=LOCUS_TYPE |
6 | status | Status of the symbol (e.g., Approved or Entry Withdrawn) | Not Processed |
7 | location | Cytogenetic location of the gene | MRSAT.ATN=CYTOGENETIC_LOCATION |
8 | location_sortable | Same as "location" but single digit chromosomes are prefixed with a 0 enabling them to be sorted in correct number order (e.g., 02q34) | Not Processed |
9 | alias_symbol | Other symbols used to refer to the gene | MRCONSO.STR |
10 | alias_name | Other names used to refer to the gene | MRCONSO.STR |
11 | prev_symbol | Symbols previously approved for this gene | MRSAT.ATN=PREV_SYMBOL |
12 | prev_name | Gene names previously approved for this gene | MRSAT.ATN=PREV_NAME |
13 | gene_group | Name given to a gene family or group the gene has been assigned to | MRSAT.ATN=GENE_FAM_DESC |
14 | gene_group_id | ID used to designate a gene family or group the gene has been assigned to | MRSAT.ATN=GENE_FAM_ID |
15 | date_approved_reserved | The date the entry was first approved | MRSAT.ATN=DATE_CREATED |
16 | date_symbol_changed | The date the gene symbol was last changed | MRSAT.ATN=DATE_SYMBOL_CHANGED |
17 | date_name_changed | The date the gene name was last changed | MRSAT.ATN=DATE_NAME_CHANGED |
18 | date_modified | Date the entry was last modified | MRSAT.ATN=DATE_LAST_MODIFIED |
19 | entrez_id | Entrez gene ID | MRSAT.ATN=ENTREZGENE_ID |
20 | ensembl_gene_id | Ensembl gene ID | MRSAT.ATN=ENSEMBLGENE_ID |
21 | vega_id | Vega gene ID | MRSAT.ATN=VEGA_ID |
22 | ucsc_id | UCSC gene ID | MRSAT.ATN=MAPPED_UCSC_ID |
23 | ena | International Nucleotide Sequence Database Collaboration accession number(s) | MRSAT.ATN=ENA |
24 | refseq_accession | RefSeq nucleotide accession(s) | MRSAT.ATN=REFSEQ_ID |
25 | ccds_id | Consensus CDS ID | MRSAT.ATN=CCDS_ID |
26 | uniprot_ids | UniProt protein accession | MRSAT.ATN=SWP |
27 | pubmed_id | Pubmed and Europe Pubmed Cental PMID(s) | MRSAT.ATN=PMID |
28 | mgd_id | Mouse genome informatics database ID | MRSAT.ATN=MGD_ID |
29 | rgd_id | Rat genome database gene ID | MRSAT.ATN=RGD_ID |
30 | lsdb | The name of the Locus specific Mutation Database and URL for the gene separated by a | character | MRSAT.ATN=LOCUS_SPECIFIC_DB_XR |
31 | cosmic | Symbol used within the Catalogue of somatic mutations in cancer for the gene | MRSAT.ATN=DB_XR_ID|COSMIC: |
32 | omim_id | Online Mendelian Inheritance in Man (OMIM) ID | MRSAT.ATN=OMIM_ID |
33 | mirbase | miRBase ID | MRSAT.ATN=DB_XR_ID|MiRBase: |
34 | homeodb | Homeobox Database ID | MRSAT.ATN=DB_XR_ID|HomeoDB: |
35 | snornabase | SnoRNABase ID | MRSAT.ATN=DB_XR_ID|snoRNABase: |
36 | bioparadigms_slc | Symbol used to link to the SLC tables database at bioparadigms.org for the gene | MRSAT.ATN=DB_XR_ID|BioParadigms: |
37 | orphanet | Orphanet ID | MRSAT.ATN=Orphanet: |
38 | pseudogene.org | Pseudogene.org ID | MRSAT.ATN=DB_XR_ID|Pseudogene.org: |
39 | horde_id | Symbol used within HORDE for the gene | MRSAT.ATN=DB_XR_ID|HORDE_ID: |
40 | merops | ID used to link to the MEROPS peptidase database | MRSAT.ATN=DB_XR_ID|MEROPS: |
41 | imgt | Symbol used within the international ImMunoGeneTics information system | MRSAT.ATN=DB_XR_ID|IMGT/GENE-DB: |
42 | iuphar | The objectID used to link to the IUPHAR/BPS Guide to PHAMACOLOGY database. | MRSAT.ATN=DB_XR_ID|IUPHAR: |
43 | kznf_gene_catalog | ID used to link to the Human KZNF Gene Catalog | MRSAT.ATN=DB_XR_ID|KZNF Gene Catalog: |
44 | mamit-trnadb | ID to link to the Mamit-tRNA database | MRSAT.ATN=DB_XR_ID|Mamit-tRNAdb: |
45 | cd | Symbol used within the Human Cell Differentiation Molecule database for the gene | MRSAT.ATN=DB_XR_ID|CD: |
46 | lncrnadb | lncRNA Database ID | MRSAT.ATN=DB_XR_ID|lncRNAdb: |
47 | enzyme_id | ENZYME EC accession number | MRSAT.ATN=EZ |
48 | intermediate_filament_db | ID used to link to the Human Intermediate filament Database | MRSAT.ATN=DB_XR_ID|Intermediate Filament DB: |
49 | rna_central_ids | RNA Central ID | MRSAT.ATN=RNA_CENTRAL_ID |
50 | lncipedia | Comprehensive compendium of human long non-coding RNAs | MRSAT.ATN=LNCIPEDIA |
51 | gtrnadb | Database that contains tRNA gene predictions made by tRNAscan-SE on complete or nearly complete genomes | MRSAT.ATN=DB_XR_ID|GtRNAdb: |
52 | agr | Alliance of Genome Resources. HGNC will link to the Human Gene page at the AGR via HGNC ID if such a page exists. | MRSAT.ATN=AGR |
53 | mane_select | NCBI and Ensembl transcript IDs/acessions including the version number for one high-quality representative transcript per protein-coding gene that is well-supported by experimental data and represents the biology of the gene. The multiple IDs are delimited by |. | MRSAT.ATN=MANE_SELECT |
54 | gencc | HGNC ID used within the GenCC database as the unique identifier of their gene reports within the GenCC database. | MRSAT.ATN=GENCC |