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Unified Medical Language System® (UMLS®)

2011AB HUGO Source Information




Skip to: Atoms, Attributes, Definitions, Relationships, Mappings

VSAB: HUGO2011_05

Summary of Changes

Values in the 'Enzyme IDs' field no longer have the 'EC' prefix.

Original Files:

File NameDescription
HUGO_2011_AllData_pl.txtComplete source data in a text file with tab delimited fields.

Identifiers

  • CODE: HGNC ID
  • SAUI: Not applicable
  • SCUI: HGNC ID
  • SDUI: Not applicable

Atoms (MRCONSO)

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Term TypeDescriptionOrigin
ACR Acronym Approved Symbol field
MTH_ACR Metathesaurus created acronym. The word 'gene' or 'gene cluster' was appended to the atom. Approved Symbol field
NA Name Synonyms Name Synonyms field
PT Preferred Name Approved Name field
SYN Synonyms Synonyms field

Suppressibility

For all term types, suppressibility value 'N' (default value)


Attributes (MRSAT)

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Attribute NameOrigin
ACCESSION_NO Accession Numbers field
GENESYMBOL Approved Symbol field
CCDS_ID CCDS ID field
CHROMOSOME Chromosome field
DATE_CREATED Date Approved field
DATE_LAST_MODIFIED Date Modified field
DATE_NAME_CHANGED Date Name Changed field
DATE_SYMBOL_CHANGED Date Symbol Changed field
ENSEMBLGEN_ID Ensembl Gene ID field
MAPPED_ENSEMBL_ID Ensembl Gene ID (mapped data supplied by Ensembl) field
ENTREZGENE_ID Entrez Gene ID field
MAPPED_ENTREZGENE_ID Entrez Gene ID (mapped data supplied by NCBI) field
EZ Enzyme ID field
MAPPED_GDB_ID GDB ID (mapped data) field
GENE_FAM Gene Family Name field
LOCUS_GROUP Locus Group field
LOCUS_SPECIFIC_DB_XR Locus Specific Databases field
LOCUS_TYPE Locus Type field
MGD_ID Mouse Genome Database ID field
MAPPED_MGD_ID Mouse Genome Database ID (mapped data supplied by MGI) field
OMIM_NUMBER OMIM ID (mapped data supplied by NCBI) field
PREV_NAME Previous Names field
PREV_SYMBOL Previous Symbols field
PRIMARY_ID Primary ID field
PMID Pubmed ID field
MAPPED_RGD_ID Rat Genome Database ID (mapped data supplied by RGD) field
RECORD_TYPE Record Type field
REFSEQ_ID RefSeq ID field
MAPPED_REFSEQ_ID RefSeq ID (mapped data supplied by NCBI) field
SECONDARY_ID Secondary ID field
DB_XR_ID Specialist Database ID field
DB_XR Specialist Database Links field
UCSC_ID UCSC ID (mapped data supplied by UCSC) field
SWP UniProt ID (mapped data supplied by UniProt) field
VEGA_ID VEGA ID field

Relationships (MRREL)

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SourceRelationshipRelationship Label/Inverse Relationship LabelDescription
HUGOCHD
PAR
SIB
(no rela)There are no CONTEXTS.
HUGOSFO/LFO has_expanded_form/expanded_form_ofConnects the Approved Symbol (TTY=ACR) with its expanded form (TTY=MTH_ACR).
HUGOSFO/LFO has_alias/alias_ofConnects the Approved Name (TTY=PT) with its Alias (TTY=SYN).

Definitions (MRDEF)

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There are no definitions.

Mappings (MRMAP)

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There are no mappings present.