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Modeling the Anatomy of the Human Heart Using the Cryosection Images of the Visible Female Dataset
F. B. Sachse, C. D. Werner, M. H. Stenroos, R. F. Schulte, P. Zerfass, O. Dössel
Institut für Biomedizinische Technik, Universität Karlsruhe (TH), Karlsruhe, Germany
Frank.Sachse@ibt.etec.uni-karlsruhe.de


Abstract
      Anatomical models of the human heart describe the distribution of tissue including the orientation of fibers and sheets. These models are the foundation for the simulation of the electrophysiological and mechanical cardiac behavior. These simulations help to improve diagnostic and surgical techniques as well as the medical education. In this work the cryosection images of the Visible Female dataset and a variety of digital image processing techniques were applied to achieve a realistic, highly detailed anatomical model of the heart. The model is stored in a three dimensional data set consisting of approximately 80 million cubic voxels. Each voxel has a size of 0.33 mm x 0.33 mm x 0.33 mm and was assigned to one out of 20 different tissue classes. The incorporation of the myocardial fiber and sheet orientation makes the model of interest for applications in the scope of numerical field calculation. The model can be applied eg in the area of elasto- and fluidmechanics as well as electrophysiology of the human heart.
 

Keywords: Anatomical model, fiber orientation, heart, lamination, preprocessing, segmentation, Visible Female
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