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Unified Medical Language System® (UMLS®)

Foundational Model of Anatomy Source Information

This page lists UMLS Metathesaurus data elements and traces them back to the specific source data that populates them.

Skip to: Notes, Summary of Changes, Summary of Source-Provided Files Source-Provided File Details

Notes

Summary of Changes

FMA4_0 inlcudes the following new data types:

Term Types:
AB (suppressible = "Y")

Relationships:
REL = SY:
RELA/inverse_RELA:
expanded_form_of/has_expanded_form (connect TTY = PT to TTY = AB)

REL = RO:
RELA/inverse_RELA:
anatomical_entity_observed_in/has_observed_anatomical_entity
anterior_to/posterior_to
attaches_to/receives_attachment_from
connected_to/connected_to
connection_type_of/has_connection_type
continuous_distally_with/continuous_proximally_with
derives/derives_from
development_type_of/has_development_type
developmental_stage_of/has_developmental_stage
direct_anterior_to/direct_posterior_to
direct_anteroinferior_to/direct_posterosuperior_to
direct_anterolateral_to/direct_posteromedial_to
direct_anteromedial_to/direct_posterolateral_to
direct_anterosuperior_to/direct_posteroinferior_to
direct_cell_shape_of/has_direct_cell_shape
direct_constitutional_part_of/has_direct_constitutional_part
direct_continuous_with/direct_continuous_with
direct_distal_to/direct_proximal_to
direct_inferior_to/direct_superior_to
direct_inferolateral_to/direct_superomedial_to
direct_inferomedial_to/direct_superolateral_to
direct_lateral_to/direct_medial_to
direct_left_of/direct_right_of
direct_part_of/has_direct_part
direct_regional_part_of/has_direct_regional_part
distal_to/proximal_to
drains_into/receives_drainage_from
external_to/internal_to
formed_by/forms
full_grown_phenotype_of/has_full_grown_phenotype
fuses_with/fuses_with
fusion_of/has_fusion
has_insertion/insertion_of
has_member/member_of
has_projection/receives_projection
has_related_developmental_entity/related_developmental_entity_of
homonym_for/homonym_of
inferior_to/superior_to
lateral_to/medial_to
left_lateral_to/right_medial_to
left_medial_to/right_lateral_to
merges_with/merges_with
projects_from/projects_to
related_object/related_object
transforms_from/transforms_into

Attributes:
AUTHORITY
CMA_LABEL
COMMENT
DATE_LAST_MODIFIED
DAYS_POST_FERTILIZATION
DEF
EPONYM
GESTATION_AGE_WEEKS
HAS_DIMENSION
HAS_DIRECT_CELL_LAYER
HAS_DIRECT_PLOIDY
HAS_DIRECT_SHAPE_TYPE
HAS_INHERENT_3D_SHAPE
JHU_DTI-81
JHU_WHITE_MATTER_TRACTOGRAPHY_ATLAS
OUTDATED_MEANING
PART_TYPE
PHYSICAL_STATE
REFERENCE
SPECIES
TALAIRACH_TERM
TA_ID
TERM_STATUS
TRANSLATION

The following data types were deprecated in FMA4_0:

Relationships:
REL = RO:
REL/inverse_rela
attaches_to/receives_attachment
attributed_constitutional_part_of/has_attributed_constitutional_part
attributed_continuous_with/attributed_continuous_with
attributed_part_of/has_attributed_part
attributed_regional_part_of/has_attributed_regional_part
cell_connecting_part_of/has_cell_connecting_part
cell_shape_of/has_cell_shape
cell_surface_specialization_of/has_cell_surface_specialization
continuous_with_distally/continuous_with_proximally
fascicular_architecture_of/has_fascicular_architecture
has_member/member_of_cluster
has_muscle_attachment/muscle_attachment_of
has_orientation/orientation_of
has_physical_state/physical_state_of
has_shape/shape_of
has_systemic_part/systemic_part_of

Attributes:
ADJACENT
ANATOMICAL_OR_ARBITRARY
CELL_LAYER
CONNECTED_TO
CONNECTION_TYPE
CONTACT_TYPE
MUSCLE_INSERTION
MUSCLE_ORIGIN
SHAPE_TYPE
SHARED_OR_UNSHARED
TALAIRACH
TALAIRACH_ID


Source Provided Files:

fma.owl

Source-Provided Files: Details

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AnnotationProperty Representation STYPE
abbreviation MRCONSO.RRF
TTY = "AB"
AB atoms are connected to their PT atom with REL = SY, RELA = expanded_form_of/has_expanded_form
AAL MRSAT.AAL_TERM (appended to annotated Target identifier SCUI
anatomical_coordinate MRSAT.ANATOMICAL_COORDINATE RUI
authority MRSAT.AUTHORITY AUI
authority (collection on an objectProperty) MRSAT.AUTHORITY RUI
cell_appendage_type MRSAT.CELL_APPENDAGE_TYPE SCUI
has_direct_number_of_pairs_per_nucleus MRSAT.CHROMOSOME_PAIRS_PER_NUCLEUS SCUI
CMA_label MRSAT.CMA_LABEL SCUI
comment MRSAT.COMMENT AUI
modification MRSAT.DATE_LAST_MODIFIED AUI
days_post_fertilization MRSAT.DAYS_POST_FERTILIZATION SCUI
dimension MRSAT.DIMENSION SCUI
Eponym MRSAT.EPONYM AUI
DK__Freesurfer_value MRSAT.FREESURFER_TERM (appended to annotatedTarget identifier) SCUI
gestation_age_weeks MRSAT.GESTATION_AGE_WEEKS RUI
has_boundary MRSAT.HAS_BOUNDARY SCUI
has_dimension MRSAT.HAS_DIMENSION SCUI
has_direct_cell_layer MRSAT.HAS_DIRECT_CELL_LAYER SCUI
has_direct_ploidy MRSAT.HAS_DIRECT_PLOIDY SCUI
has_direct_shape_type MRSAT.HAS_DIRECT_SHAPE_TYPE SCUI
has_inherent_3D_shape MRSAT.HAS_INHERENT_3D_SHAPE SCUI
has_mass MRSAT.HAS_MASS SCUI
JHU_DTI-81 MRSAT.JHU_DTI-81 SCUI
JHU_White-Matter_Tractography_Atlas MRSAT.JHU_WHITE_MATTER_TRACTOGRAPHY_ATLAS SCUI
language MRSAT.LANGUAGE AUI (included only if language = "Latin")
laterality MRSAT.LATERALITY RUI
Neurolex MRSAT.NEUROLEX_ID SCUI
outdated_meaning MRSAT.OUTDATED_MEANING AUI
partition MRSAT.PARTITION RUI
part_type MRSAT.PART_TYPE RUI
physical_state MRSAT.PHYSICAL_STATE SCUI
polarity MRSAT.POLARITY SCUI
preferred_name MRCONSO.TTY = PT, OP Children of concept "Deprecated Term" are assigned obsolete TTYs.
RadLex_ID MRSAT.RADLEX_ID SCUI
reference MRSAT.REFERENCE RUI
species MRSAT.SPECIES SCUI
state_of_determination MRSAT.STATE_OF_DETERMINATION SCUI
synonym MRCONSO.TTY = SY
Talairach (appended to annotationTarget identifier) MRSAT.TALAIRACH_TERM SCUI
TA_ID MRSAT.TA_ID AUI
term_status MRSAT.TERM_STATUS AUI
concatenate language with string, e.g. "French: Veines tympaniques" MRSAT.TRANSLATION SCUI
view MRSAT.VIEW RUI

Definitions (MRDEF):

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Definitions are created from data in the "definition" property.


Relationships (MRREL):

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Origin (ObjectProperty)
If no inverse is listed below, the inverse was not indicated in the original owl file property definition
Some inverse RELA values were inferred during Metathesaurus source processing
MRREL.RELA/Inverse RELA (REL = "RO")
adheres_to adheres_to/has_adherent
adjacent_to/adjacent_to adjacent_to/adjacent_to
afferent_to/efferent_to afferent_to/efferent_to
anatomical_entity_observed anatomical_entity_observed_in/has_observed_anatomical_entity
anterior_to/posterior_to anterior_to/posterior_to
arterial_supply_of/arterial_supply arterial_supply_of/has_arterial_supply
articulates_with/articulates_with articulates_with/articulates_with
attaches_to/receives_attachment_from attaches_to/receives_attachment_from
bounded_by/bounds bounded_by/bounds
branch_of/has_branch branch_of/has_branch
connected_to connected_to/connected_to
connection_type connection_type_of/has_connection_type
constitutional_part/constitutional_part_of constitutional_part_of/has_constitutional_part
contained_in/contains contained_in/contains
branch__continuity_ continuation_branch_of/has_continuation_branch
continuous_distally_with/continuous_proximally_with continuous_distally_with/continuous_proximally_with
continuous_with continuous_with/continuous_with
derives/derives_from derives/derives_from
development_type development_type_of/has_development_type
developmental_stage_of/has_developmental_stage developmental_stage_of/has_developmental_stage
develops_from/gives_rise_to develops_from/gives_rise_to
direct_anterior_to direct_anterior_to/direct_posterior_to
direct_anteroinferior_to direct_anteroinferior_to/direct_posterosuperior_to
direct_anterolateral_to direct_anterolateral_to/direct_posteromedial_to
direct_anteromedial_to direct_anteromedial_to/direct_posterolateral_to
direct_anteromedial_to direct_anterosuperior_to/direct_posteroinferior_to
direct_cell_shape_of/has_direct_cell_shape direct_cell_shape_of/has_direct_cell_shape
direct_constitutional_part direct_constitutional_part_of/has_direct_constitutional_part
direct_continuous_with/direct_continuous_with direct_continuous_with/direct_continuous_with
direct_distal_to/direct_proximal_to direct_distal_to/direct_proximal_to
direct_inferior_to/direct_superior_to direct_inferior_to/direct_superior_to
direct_inferolateral_to/direct_superomedial_to direct_inferolateral_to/direct_superomedial_to
direct_inferomedial_to/direct_superolateral_to direct_inferomedial_to/direct_superolateral_to
direct_lateral_to/direct_medial_to direct_lateral_to/direct_medial_to
direct_left_of/direct_right_of direct_left_of/direct_right_of
direct_part
direct_part_of/has_direct_part
direct_regional_part_of/has_direct_regional_part direct_regional_part_of/has_direct_regional_part
distal_to/proximal_to distal_to/proximal_to
drains_into/receives_drainage_from drains_into/receives_drainage_from
external_to external_to/internal_to
forms formed_by/forms
full_grown_phenotype full_grown_phenotype_of/has_full_grown_phenotype
fuses_with fuses_with/fuses_with
fusion_of fusion_of/has_fusion
germ_origin germ_origin_of/has_germ_origin
has_inherent_3-D_shape/inherent_3-D_shape has_inherent_3d_shape/inherent_3d_shape_of
has_insertion/insertion_of has_insertion/insertion_of
located_in/location_of has_location/location_of
lymphatic_drainage/lymphatic_drainage_of has_lymphatic_drainage/lymphatic_drainage_of
member/member_of has_member/member_of
muscle_insertion has_muscle_insertion/muscle_insertion_of
muscle_origin/muscle_origin_of has_muscle_origin/muscle_origin_of
nerve_supply/nerve_supply_of has_nerve_supply/nerve_supply_of
has_origin/origin_of has_origin/origin_of
part/part_of has_part/part_of
primary_segmental_supply/primary_segmental_supply_of has_primary_segmental_supply/primary_segmental_supply_of
has_projection/receives_projection has_projection/receives_projection
regional_part/regional_part_of has_regional_part/regional_part_of
related_developmental_entity has_related_developmental_entity/related_developmental_entity_of
secondary_segmental_supply/secondary_segmental_supply_of has_secondary_segmental_supply/secondary_segmental_supply_of
segmental_composition/segmental_composition_of has_segmental_composition/segmental_composition_of
segmental_supply/segmental_supply_of has_segmental_supply/segmental_supply_of
tributary/tributary_of has_tributary/tributary_of
venous_drainage/venous_drainage_of has_venous_drainage/venous_drainage_of
homonym_for/homonym_of homonym_for/homonym_of
inferior_to/superior_to inferior_to/superior_to
lateral_to/medial_to lateral_to/medial_to
left_lateral_to/right_medial_to left_lateral_to/right_medial_to
left_medial_to/right_lateral_to left_medial_to/right_lateral_to
merges_with merges_with/merges_with
projects_from/projects_to projects_from/projects_to
receives_input_from/sends_output_to receives_input_from/sends_output_to
related_object related_object/related_object
surrounded_by/surrounds surrounded_by/surrounds
transforms_from/transforms_into transforms_from/transforms_into