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Porter Lab: Publications


2023


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Distinguishing features of fold-switching proteins

Chakravarty, D., Schafer, J.W., Porter, L.L.*

Protein Science
[PDF]

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Evolutionary selection of proteins with two folds

Schafer, J.W., Porter, L.L.*

bioRxiv
[PDF]


2022


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Identification of a covert evolutionary pathway between two protein folds

Chakravarty, D., Sreenivasan, S., Swint-Kruse, S., Porter, L.L.*

bioRxiv
[PDF]

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Many dissimilar NusG protein domains switch between α-helix and β-sheet folds

Porter, L.L.*, Kim, A.K., Rimal, S., Looger, L.L., Majumdar, A., Mensh, B.D., Starich, M.S., and Strub, M.P.

Nature Communications
[PDF]

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AlphaFold2 fails to predict protein fold switching

Chakravarty, D., Porter, L.L.*

Protein Science
[PDF]

2021


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Fold-switching proteins

LiWang, A.*, Porter,L.L.*, Wang, L.P.*

Biopolymers
[PDF]

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Predictable fold switching by the SARS‐CoV‐2 protein ORF9b

Porter, L.L.*

Protein Science [PDF]

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A sequence-based method for predicting extant fold switchers that undergo alpha-helix to beta-strand transitions

Mishra, S., Looger, L.L., Porter, L.L.*

Biopolymers [PDF]

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A high-throughput predictive method for sequence-similar fold switchers

Kim, A.K., Looger, L.L., Porter, L.L.*

Biopolymers [PDF]

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Functional and regulatory roles of fold-switching proteins

Kim, A.K., Porter, L.L.*

Structure [PDF]


2019


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Inaccurate secondary structure predictions often indicate protein fold switching

Mishra, S., Looger, L.L., Porter, L.L.*

Protein Science [PDF]