Workshop Schedule
Tuesday, June 18
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| MORNING | ||||
| 10:00 am - 10:45 am |
3:00 am - 3:45 am |
Valerie Schneider, PhD Acting Chief - Information Engineering Branch |
 The Power of Shared Research Data |
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| 10:45 am - 12:00 pm |
3:45 am - 5:00 am |
 TECH CHECK |
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| 1 hour LUNCH | ||||
| AFTERNOON |
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| 1:00 pm - 2:15 pm |
6:00 am - 7:15 am |
Chris O'Sullivan, PhD SRA Lead |
NIH Sequence Read Archive (SRA) Database: An overview |
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| Jonathan (Jon) Trow, PhD SRA Curator |
 Linking Sequence Data to Metadata |
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| 15 minute BREAK | ||||
| 2:30 pm - 4:00 pm |
7:;30 am - 9:00 am |
Jonathan (Jon) Trow, PhD SRA Curator |
Submission Demo: BioProject and BioSample Databases |
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| Jonathan (Jon) Trow, PhD SRA Curator |
Submission Demo: Sequence Read Archive (SRA) Database |
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| 15 min BREAK | ||||
| 4:15 pm - 6:00 pm |
9:15 am - 11:00 am |
Bill Klimke, PhD Product Owner - Pathogen Detection |
Pathogen Detection Resource |
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| Bill Klimke, PhD Product Owner - Pathogen Detection Eneida Hatcher, PhD Product Owner - NCBI Virus |
Exercise: Searching for Data |
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Wednesday, June 19
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| MORNING | ||||
| 10:00 am - 12:00 pm |
3:00 am - 5:00 am |
Jonathan (Jon) Trow, PhD SRA Curator |
Exercise: SRA Submission |
Sample_1_R1.fastq Sample_1_R2.fastq Sample_2_R1.fastq Sample_2_R2.fastq |
1 hour LUNCH |
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| AFTERNOON |
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| 1:00 pm - 2:15 pm |
6:00 am - 7:15 am |
Susan Schafer, PhD GenBank Biocuration Scientist |
Introduction to GenBank |
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| Vinvent (Vince) Calhoun, PhD GenBank Biocuration Scientist |
Viral Submissions: GenBank Automated Annotation Pipeline |
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| 15 min Break | ||||
| 2:45 pm - 6:00 pm |
7:45 am - 11:00 am |
Linda Frisse, PhD Genomes Team Lead - GenBank |
Submitting Genomes |
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| Linda Yankie, PhD Product Owner - GenBank |
Exercise: Submitting to GenBank |
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Thursday, June 20
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| MORNING | ||||
| 10:00 am - 12:00 pm |
3:00 am - 5:00 am |
Linda Yankie, PhD Product Owner - GenBank |
Exercise: Submitting to GenBank (continued) |
Access the PDF file on Wednesday's schedule. |
1 hour LUNCH |
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| AFTERNOON |
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| 1:00 pm - 5:00 pm |
6:00 am - 10:00 am |
Eneida Hatcher, PhD Product Owner - NCBI Virus |
NCBI Virus: Viral Sequences and Data |
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| Chris O'Sullivan, PhD SRA Lead Linda Yankie, PhD GenBank Team Lead Valerie Schneider, PhD Acting Chief - Information Engineering Branch |
Review & Wrap-up |
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What do those icons mean?
| - an in-person presentation - a live, online presentation - a session for active participation |
- click to access a PDF file - video recordings coming soon |
Last Reviewed: June 18, 2024