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Unified Medical Language System® (UMLS®)

Foundational Model of Anatomy Source Information

This page lists UMLS Metathesaurus data elements and traces them back to the specific source data that populates them.

Skip to: Atoms, Attributes, Definitions, Relationships, Mappings

VSAB: FMA4_0

Summary of Changes

FMA4_0 inlcudes the following new data types:

Term Types:
AB (suppressible = "Y")

Relationships:
REL = SY:
RELA/inverse_RELA:
expanded_form_of/has_expanded_form (connect TTY = PT to TTY = AB)

REL = RO:
RELA/inverse_RELA:
anatomical_entity_observed_in/has_observed_anatomical_entity
anterior_to/posterior_to
attaches_to/receives_attachment_from
connected_to/connected_to
connection_type_of/has_connection_type
continuous_distally_with/continuous_proximally_with
derives/derives_from
development_type_of/has_development_type
developmental_stage_of/has_developmental_stage
direct_anterior_to/direct_posterior_to
direct_anteroinferior_to/direct_posterosuperior_to
direct_anterolateral_to/direct_posteromedial_to
direct_anteromedial_to/direct_posterolateral_to
direct_anterosuperior_to/direct_posteroinferior_to
direct_cell_shape_of/has_direct_cell_shape
direct_constitutional_part_of/has_direct_constitutional_part
direct_continuous_with/direct_continuous_with
direct_distal_to/direct_proximal_to
direct_inferior_to/direct_superior_to
direct_inferolateral_to/direct_superomedial_to
direct_inferomedial_to/direct_superolateral_to
direct_lateral_to/direct_medial_to
direct_left_of/direct_right_of
direct_part_of/has_direct_part
direct_regional_part_of/has_direct_regional_part
distal_to/proximal_to
drains_into/receives_drainage_from
external_to/internal_to
formed_by/forms
full_grown_phenotype_of/has_full_grown_phenotype
fuses_with/fuses_with
fusion_of/has_fusion
has_insertion/insertion_of
has_member/member_of
has_projection/receives_projection
has_related_developmental_entity/related_developmental_entity_of
homonym_for/homonym_of
inferior_to/superior_to
lateral_to/medial_to
left_lateral_to/right_medial_to
left_medial_to/right_lateral_to
merges_with/merges_with
projects_from/projects_to
related_object/related_object
transforms_from/transforms_into

Attributes:
AUTHORITY
CMA_LABEL
COMMENT
DATE_LAST_MODIFIED
DAYS_POST_FERTILIZATION
DEF
EPONYM
GESTATION_AGE_WEEKS
HAS_DIMENSION
HAS_DIRECT_CELL_LAYER
HAS_DIRECT_PLOIDY
HAS_DIRECT_SHAPE_TYPE
HAS_INHERENT_3D_SHAPE
JHU_DTI-81
JHU_WHITE_MATTER_TRACTOGRAPHY_ATLAS
OUTDATED_MEANING
PART_TYPE
PHYSICAL_STATE
REFERENCE
SPECIES
TALAIRACH_TERM
TA_ID
TERM_STATUS
TRANSLATION

The following data types were deprecated in FMA4_0:

Relationships:
REL = RO:
REL/inverse_rela
attaches_to/receives_attachment
attributed_constitutional_part_of/has_attributed_constitutional_part
attributed_continuous_with/attributed_continuous_with
attributed_part_of/has_attributed_part
attributed_regional_part_of/has_attributed_regional_part
cell_connecting_part_of/has_cell_connecting_part
cell_shape_of/has_cell_shape
cell_surface_specialization_of/has_cell_surface_specialization
continuous_with_distally/continuous_with_proximally
fascicular_architecture_of/has_fascicular_architecture
has_member/member_of_cluster
has_muscle_attachment/muscle_attachment_of
has_orientation/orientation_of
has_physical_state/physical_state_of
has_shape/shape_of
has_systemic_part/systemic_part_of

Attributes:
ADJACENT
ANATOMICAL_OR_ARBITRARY
CELL_LAYER
CONNECTED_TO
CONNECTION_TYPE
CONTACT_TYPE
MUSCLE_INSERTION
MUSCLE_ORIGIN
SHAPE_TYPE
SHARED_OR_UNSHARED
TALAIRACH
TALAIRACH_ID


Source Provided Files:

fma.owl

Identifiers:

Identifiers are assigned as follows:
  • CODE: FMAID
  • SAUI: Not applicable
  • SCUI: same as CODE
  • SDUI: Not applicable

Atoms (MRCONSO):

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Term Type Origin (property)
OP preferred_name (children of the concept "Deprecated term" are assigned obsolete term types)
PT preferred_name
SY synonym;  Latin_name__TA_

Attributes (MRSAT):


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Attribute Name Origin (property) STYPE
AAL_TERM Axiom annotatedTarget concatenated with AAL value SCUI
ANATOMICAL_COORDINATE anatomical_coordinate RUI
AUTHORITY authority AUI
AUTHORITY authority (collection on an objectProperty) RUI
CELL_APPENDAGE_TYPE cell_appendage_type SCUI
CHROMOSOME_PAIRS_PER_NUCLEUS has_direct_number_of_pairs_per_nucleus SCUI
CMA_LABEL CMA_label SCUI
COMMENT comment AUI
DATE_LAST_MODIFIED modification AUI
DAYS_POST_FERTILIZATION days_post_fertilization SCUI
DIMENSION dimension SCUI
EPONYM Eponym AUI
FREESURFER_TERM annotagedTarget concatenated with DK__Freesurfer_value SCUI
GESTATION_AGE_WEEKS gestation_age_weeks RUI
HAS_BOUNDARY has_boundary SCUI
HAS_DIMENSION has_dimension SCUI
HAS_DIRECT_CELL_LAYER has_direct_cell_layer SCUI
HAS_DIRECT_PLOIDY has_direct_ploidy SCUI
HAS_DIRECT_SHAPE_TYPE has_direct_shape_type SCUI
HAS_INHERENT_3D_SHAPE has_inherent_3D_shape SCUI
HAS_MASS has_mass SCUI
JHU_DTI-81 JHU_DTI-81 SCUI
JHU_WHITE_MATTER_TRACTOGRAPHY_ATLAS JHU_White-Matter_Tractography_Atlas SCUI
LANGUAGE included if language = "Latin" only AUI
LATERALITY laterality RUI
NEUROLEX_ID Neurolex SCUI
OUTDATED_MEANING outdated_meaning AUI
PARTITION partition RUI
PART_TYPE part_type RUI
PHYSICAL_STATE physical_state SCUI
POLARITY polarity SCUI
RADLEX_ID RadLex_ID SCUI
REFERENCE reference RUI
SPECIES species SCUI
STATE_OF_DETERMINATION state_of_determination SCUI
TALAIRACH_TERM Axium annotatedTarget concatenated with Talairach SCUI
TA_ID TA_ID AUI
TERM_STATUS term_status AUI
TRANSLATION concatenate language with string, e.g. "French: Veines tympaniques" SCUI
VIEW view RUI

Definitions (MRDEF):

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Definitions are created from data in the "definition" property.


Relationships (MRREL):

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REL RELA
Inverse RELA
Origin (property)
If no inverse is listed below, the inverse was not indicated in the original owl file property definition
Some inverse RELA values were inferred during Metathesaurus source processing
SY expanded_form_of/has_expanded_form Connects abbreviation to preferred_term
RO adheres_to/has_adherent adheres_to
RO adjacent_to/adjacent_to adjacent_to/adjacent_to
RO afferent_to/efferent_to afferent_to/efferent_to
RO anatomical_entity_observed_in/has_observed_anatomical_entity anatomical_entity_observed
RO anterior_to/posterior_to anterior_to/posterior_to
RO arterial_supply_of/has_arterial_supply arterial_supply_of/arterial_supply
RO articulates_with/articulates_with articulates_with/articulates_with
RO attaches_to/receives_attachment_from attaches_to/receives_attachment_from
RO bounded_by/bounds bounded_by/bounds
RO branch_of/has_branch branch_of/has_branch
RO connected_to/connected_to connected_to
RO connection_type_of/has_connection_type connection_type
RO constitutional_part_of/has_constitutional_part constitutional_part/constitutional_part_of
RO contained_in/contains contained_in/contains
RO continuation_branch_of/has_continuation_branch branch__continuity_
RO continuous_distally_with/continuous_proximally_with continuous_distally_with/continuous_proximally_with
RO continuous_with/continuous_with continuous_with
RO derives/derives_from derives/derives_from
RO development_type_of/has_development_type development_type
RO developmental_stage_of/has_developmental_stage developmental_stage_of/has_developmental_stage
RO develops_from/gives_rise_to develops_from/gives_rise_to
RO direct_anterior_to/direct_posterior_to direct_anterior_to
RO direct_anteroinferior_to/direct_posterosuperior_to direct_anteroinferior_to
RO direct_anterolateral_to/direct_posteromedial_to direct_anterolateral_to
RO direct_anteromedial_to/direct_posterolateral_to direct_anteromedial_to
RO direct_anterosuperior_to/direct_posteroinferior_to direct_anteromedial_to
RO direct_cell_shape_of/has_direct_cell_shape direct_cell_shape_of/has_direct_cell_shape
RO direct_constitutional_part_of/has_direct_constitutional_part direct_constitutional_part
RO direct_continuous_with/direct_continuous_with direct_continuous_with/direct_continuous_with
RO direct_distal_to/direct_proximal_to direct_distal_to/direct_proximal_to
RO direct_inferior_to/direct_superior_to direct_inferior_to/direct_superior_to
RO direct_inferolateral_to/direct_superomedial_to direct_inferolateral_to/direct_superomedial_to
RO direct_inferomedial_to/direct_superolateral_to direct_inferomedial_to/direct_superolateral_to
RO direct_lateral_to/direct_medial_to direct_lateral_to/direct_medial_to
RO direct_left_of/direct_right_of direct_left_of/direct_right_of
RO direct_part_of/has_direct_part direct_part
RO direct_regional_part_of/has_direct_regional_part direct_regional_part_of/has_direct_regional_part
RO distal_to/proximal_to distal_to/proximal_to
RO drains_into/receives_drainage_from drains_into/receives_drainage_from
RO external_to/internal_to external_to
RO formed_by/forms forms
RO full_grown_phenotype_of/has_full_grown_phenotype full_grown_phenotype
RO fuses_with/fuses_with fuses_with
RO fusion_of/has_fusion fusion_of
RO germ_origin_of/has_germ_origin germ_origin
RO has_inherent_3d_shape/inherent_3d_shape_of has_inherent_3-D_shape/inherent_3-D_shape
RO has_insertion/insertion_of has_insertion/insertion_of
RO has_location/location_of located_in/location_of
RO has_lymphatic_drainage/lymphatic_drainage_of lymphatic_drainage/lymphatic_drainage_of
RO has_member/member_of member/member_of
RO has_muscle_insertion/muscle_insertion_of muscle_insertion
RO has_muscle_origin/muscle_origin_of muscle_origin/muscle_origin_of
RO has_nerve_supply/nerve_supply_of nerve_supply/nerve_supply_of
RO has_origin/origin_of has_origin/origin_of
RO has_part/part_of part/part_of
RO has_primary_segmental_supply/primary_segmental_supply_of primary_segmental_supply/primary_segmental_supply_of
RO has_projection/receives_projection has_projection/receives_projection
RO has_regional_part/regional_part_of regional_part/regional_part_of
RO has_related_developmental_entity/related_developmental_entity_of related_developmental_entity
RO has_secondary_segmental_supply/secondary_segmental_supply_of secondary_segmental_supply/secondary_segmental_supply_of
RO has_segmental_composition/segmental_composition_of segmental_composition/segmental_composition_of
RO has_segmental_supply/segmental_supply_of segmental_supply/segmental_supply_of
RO has_tributary/tributary_of tributary/tributary_of
RO has_venous_drainage/venous_drainage_of venous_drainage/venous_drainage_of
RO homonym_for/homonym_of homonym_for/homonym_of
RO inferior_to/superior_to inferior_to/superior_to
RO lateral_to/medial_to lateral_to/medial_to
RO left_lateral_to/right_medial_to left_lateral_to/right_medial_to
RO left_medial_to/right_lateral_to left_medial_to/right_lateral_to
RO merges_with/merges_with merges_with
RO projects_from/projects_to projects_from/projects_to
RO receives_input_from/sends_output_to receives_input_from/sends_output_to
RO related_object/related_object related_object
RO surrounded_by/surrounds surrounded_by/surrounds
RO transforms_from/transforms_into transforms_from/transforms_into



Mappings (MRMAP):

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No mappings to external sources are provided for FMA.